The detailed information of tRNA gene sequence


Sequence ID>ENV08001991
Genome IDABOK01218729
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 79
End posion on genome 6
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
taaggaagga
tRNA gene sequence 
GATTCCGTAGCTCAGTTGGTAGAGCAATACACTTTTAATGTATGGGTCCTGGGTTCGAGT
CCCAGCGGGATCACtg
Downstream region at tRNA end position 
aatnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001991	Lys	TTT
                   a      ACtg aatnnnnnnn
                     G - C
                     A - T
                     T - A
                     T + G
                     C - G
                     C - G
                     G - C          T G
                    T     G A C C C     A
      T G A        A      | | | | |     G
    T       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    A - T
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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