The detailed information of tRNA gene sequence


Sequence ID>WENV170018045
Genome IDBARV01006657
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 421
End posion on genome 514
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caaataaaat
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGGTCGCCTGCTAAGCGATTAAGTGCCCATAAAGG
TGCTTCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gtttaggggc
Secondary structure (Cloverleaf model)
>WENV170018045	Ser	GCT
                   t      GCCA gtttaggggc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TAAGTGCCCATAAAGGTGCTTC
                    G + T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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