The detailed information of tRNA gene sequence


Sequence ID>WENV170018057
Genome IDBARV01007606
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 1001
End posion on genome 926
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tagataatgt
tRNA gene sequence 
GGGGCTGTAGCGCAGTCGGGAGCGCGCCTCCTTGGCGTGGAGGAGGTCGCGGGTTCGATT
CCCGCCAGCTCCACCA
Downstream region at tRNA end position 
aattataagg
Secondary structure (Cloverleaf model)
>WENV170018057	Ala	GGC
                   t      ACCA aattataagg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T T
                    T     C G C C C     A
      T G A        A      | | | | |     G
    C       C G C G       G C G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       T
                  T       G
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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