The detailed information of tRNA gene sequence


Sequence ID>WENV170018133
Genome IDBARV01017924
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 642
End posion on genome 570
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
ttctgcctgc
tRNA gene sequence
GGCAGCGTAGCTCAGTGGTAGAGCAGAGGACTCATAAGCCTTTGGTCGTGGGTTCAAATC
CCTCCGCTGCCACtt
Downstream region at tRNA end position
tttatattag
Secondary structure (Cloverleaf model)
>WENV170018133	Met	CAT
                   c      ACtt tttatattag
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
        G A        A      |   | | |     A
      T     C T C G       G T G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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