The detailed information of tRNA gene sequence


Sequence ID>WENV170018134
Genome IDBARV01018069
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 435
End posion on genome 509
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ataacctttT
tRNA gene sequence 
GGGGCTGTAGCTCAACTGGGAGAGCGCCTCCCTTGCACGGAGGAGGTCAGGGGTTCGAAT
CCCCTCAGCTCCAGtg
Downstream region at tRNA end position 
ggagggatcg
Secondary structure (Cloverleaf model)
>WENV170018134	Ala	TGC
                   T      AGtg ggagggatcg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T C C C C     A
      C A A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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