The detailed information of tRNA gene sequence


Sequence ID>ENV08001993
Genome IDABOK01230420
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 27
End posion on genome 102
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
ttgttgaaat
tRNA gene sequence 
GCGGGAATAGCTCAGTTGGTAGAGCGATACCTTGCCAAGGTATAGGTCGCGAGTTCGAGT
CTCGTTTCCCGCTCCA
Downstream region at tRNA end position 
aattnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001993	Gly	GCC
                   t      TCCA aattnnnnnn
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    T - A
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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