The detailed information of tRNA gene sequence


Sequence ID>WENV170018182
Genome IDBARV01022748
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 189
End posion on genome 264
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gcacgaactt
tRNA gene sequence 
GGGCGGTTAGCTCAGTGGTTAGAGCGCTTGCTTCACACGCAAGAGGTCACTGGTTCAAGT
CCAGTATCGCCCACCA
Downstream region at tRNA end position 
tgtgcagtgc
Secondary structure (Cloverleaf model)
>WENV170018182	Val	CAC
                   t      ACCA tgtgcagtgc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G + T
                     T - A          T G
                    T     T G A C C     A
      T G A        A      | | | | |     A
    G       C T C G       A C T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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