The detailed information of tRNA gene sequence


Sequence ID>WENV170018224
Genome IDBARV01026729
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 546
End posion on genome 618
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gctgtacttc
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCGTGGGTTCGAAT
CCCATTGGCTCCAatt
Downstream region at tRNA end position 
ttcatttccc
Secondary structure (Cloverleaf model)
>WENV170018224	Ala	GGC
                   c      Aatt ttcatttccc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     T A C C C     A
      C G A        A      + | | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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