The detailed information of tRNA gene sequence


Sequence ID>WENV170018231
Genome IDBARV01028220
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 492
End posion on genome 417
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gactgttctt
tRNA gene sequence 
GGGGCTGTAGCTCAACTGGGAGAGCGCCTCCCTTGCACGGAGGAGGTCAGGGGTTCGAAT
CCCCTCAGCTCCACCA
Downstream region at tRNA end position 
tcgggaataa
Secondary structure (Cloverleaf model)
>WENV170018231	Ala	TGC
                   t      ACCA tcgggaataa
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T C C C C     A
      C A A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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