The detailed information of tRNA gene sequence


Sequence ID>WENV170018273
Genome IDBARV01034001
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 253
End posion on genome 179
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
aattgaattT
tRNA gene sequence 
GGGGATATAGCTCAGTTGGGAGAGCGCTGCGTTCGCATCGCAGAGGTCGGGGGTTCGAAT
CCCCCTATCTCCATtg
Downstream region at tRNA end position 
tttgcaaaag
Secondary structure (Cloverleaf model)
>WENV170018273	Ala	CGC
                   T      ATtg tttgcaaaag
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     A - T          T A
                    T     C C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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