The detailed information of tRNA gene sequence


Sequence ID>WENV170018319
Genome IDBARW01000663
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 1417
End posion on genome 1341
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cttgttgagt
tRNA gene sequence 
AGGAGTGTAGCTCAGTTTGGGAGAGCAGCGGTCTCCAAAACCGCAGGGCGGGGGTTCGAG
TCCCTCCACTCCTGCCA
Downstream region at tRNA end position 
gtttttagct
Secondary structure (Cloverleaf model)
>WENV170018319	Trp	CCA
                   t      GCCA gtttttagct
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        A     AGGGC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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