The detailed information of tRNA gene sequence


Sequence ID>WENV170018401
Genome IDBARW01009198
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 886
End posion on genome 962
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ttgtggtttt
tRNA gene sequence 
CGGGGCGTAGCGCAGTTTGGAAGCGCGCTTGGTTCGGGATCAAGAGGTCGGAGGTTCAAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170018401	Pro	CGG
                   t      ACCA nnnnnnnnnn
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      T G A        A      + | | | |     A
    T       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G A A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G + T
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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