The detailed information of tRNA gene sequence


Sequence ID>WENV170018497
Genome IDBARW01028631
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 250
End posion on genome 178
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgagtttgaa
tRNA gene sequence 
GGGCTCGTAGCTCAGCGGCAGAGCAGGCGGCTCATAACCGTCCGGTCGCAGGTTCGAATC
CTGCCGAGCCCACtt
Downstream region at tRNA end position 
aatttttcaa
Secondary structure (Cloverleaf model)
>WENV170018497	Met	CAT
                   a      ACtt aatttttcaa
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C G T C C     A
        G A        A      | | | | |     G
      C     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     CGGTC
                    G - C
                    G + T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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