The detailed information of tRNA gene sequence


Sequence ID>ENV08001997
Genome IDABOK01257349
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 100
End posion on genome 25
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
nnnnntctat
tRNA gene sequence 
TCTCCCATAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCGCAGGTCCCTGGTTCGAGC
CCAGGTGGGAGAGCCA
Downstream region at tRNA end position 
agattctgaa
Secondary structure (Cloverleaf model)
>ENV08001997	Asn	GTT
                   t      GCCA agattctgaa
                     T - A
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          C G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    C       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A   C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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