The detailed information of tRNA gene sequence


Sequence ID>WENV170018582
Genome IDBBPD01000040
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 35838
End posion on genome 35763
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccgcgctcct
tRNA gene sequence 
AGGAGTGTAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGCCGGGGGTTCGAGT
CCCTCCACTCCTGCCA
Downstream region at tRNA end position 
acgcctgaag
Secondary structure (Cloverleaf model)
>WENV170018582	Trp	CCA
                   t      GCCA acgcctgaag
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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