The detailed information of tRNA gene sequence


Sequence ID>WENV170018606
Genome IDBBPD01000115
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 14299
End posion on genome 14375
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aggtttcggc
tRNA gene sequence 
GGAGTGGTAGTTCAGTCGGTTAGAATGCTGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCCACTCCGCCA
Downstream region at tRNA end position 
ttttaaatcc
Secondary structure (Cloverleaf model)
>WENV170018606	Asp	GTC
                   c      GCCA ttttaaatcc
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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