The detailed information of tRNA gene sequence


Sequence ID>WENV170018610
Genome IDBBPD01000120
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 24404
End posion on genome 24329
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
agatggtttc
tRNA gene sequence 
GGGGCCTTAGCTCAGCTGGGAGAGCGCTACAATGGCATTGTAGAGGTCAGCGGTTCGATC
CCGCTAGGCTCCACCA
Downstream region at tRNA end position 
tcttcccaat
Secondary structure (Cloverleaf model)
>WENV170018610	Ala	GGC
                   c      ACCA tcttcccaat
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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