The detailed information of tRNA gene sequence


Sequence ID>WENV170018624
Genome IDBBPD01000157
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 11552
End posion on genome 11640
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caggatacat
tRNA gene sequence 
GGAGAGGTGCTGGAGTGGACGATCAGGCGCGCCTGGAGAGCGCGTGTCGCCTTTGGTGAC
CGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gtttaggaac
Secondary structure (Cloverleaf model)
>WENV170018624	Ser	GGA
                   t      GCCA gtttaggaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G T C       G T G G G     C
    G       + | | |                 T T
    A       T C A G
      C G A        G     TGTCGCCTTTGGTGACC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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