The detailed information of tRNA gene sequence


Sequence ID>WENV170018636
Genome IDBBPD01000199
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 6551
End posion on genome 6460
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtcggcgcct
tRNA gene sequence 
GGAGTCGTGGGTGAGTGGCTGAAACCAGCAGTTTGCTAAACTGCCGTGCTGGGTAACCGG
CACCGAGGGTTCGAATCCCTCCGACTCCGCCA
Downstream region at tRNA end position 
ccgggcttgt
Secondary structure (Cloverleaf model)
>WENV170018636	Ser	GCT
                   t      GCCA ccgggcttgt
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTGCTGGGTAACCGGCACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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