The detailed information of tRNA gene sequence


Sequence ID>WENV170018654
Genome IDBBPD01000268
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 5533
End posion on genome 5608
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position
ctgaatcggt
tRNA gene sequence
GGGGCTATAGCTCAGCTGGGAGAGCGCTACAATGGCATTGTAGAGGTCATCGGTTCGATC
CCGATTAGCTCCACCA
Downstream region at tRNA end position
cttgcttcgc
Secondary structure (Cloverleaf model)
>WENV170018654	Ala	GGC
                   t      ACCA cttgcttcgc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C T
                    T     T A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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