The detailed information of tRNA gene sequence


Sequence ID>WENV170018671
Genome IDBBPD01000308
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 19614
End posion on genome 19706
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcgagacttc
tRNA gene sequence 
GGAGCGATGACCGAGTGGCCGAAGGTGCTCCCCTGCTAAGGGAGTATGGGGTGTAGAGCC
TCATCGAGGGTTCGAATCCCTCTCGCTCCGCCA
Downstream region at tRNA end position 
aataaaaaac
Secondary structure (Cloverleaf model)
>WENV170018671	Ser	GCT
                   c      GCCA aataaaaaac
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TATGGGGTGTAGAGCCTCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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