The detailed information of tRNA gene sequence


Sequence ID>ENV08001998
Genome IDABOK01265578
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 12
End posion on genome 87
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaccaactct
tRNA gene sequence 
GGAGTGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGTCGCGGGTTCGAGC
CCCGTCCACTCCGCCA
Downstream region at tRNA end position 
aacaaaaaag
Secondary structure (Cloverleaf model)
>ENV08001998	Asp	GTC
                   t      GCCA aacaaaaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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