The detailed information of tRNA gene sequence


Sequence ID>WENV170018695
Genome IDBBPD01000405
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 50746
End posion on genome 50670
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcgccgctgc
tRNA gene sequence 
GGAGCGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
CCCCGTCCGCTCCGCCA
Downstream region at tRNA end position 
acgacatcct
Secondary structure (Cloverleaf model)
>WENV170018695	Asp	GTC
                   c      GCCA acgacatcct
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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