The detailed information of tRNA gene sequence


Sequence ID>WENV170018706
Genome IDBBPD01000454
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 16505
End posion on genome 16420
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gtgcgcgcgt
tRNA gene sequence 
GGGGGCGTGCCGGAACGGTAGACGGACCCGGCTCAAAATCGGGCGGCCGCAAGGCCTTGG
GGGTTCGAGTCCCCCCGCCCCTACCA
Downstream region at tRNA end position 
ccaaccttcc
Secondary structure (Cloverleaf model)
>WENV170018706	Leu	CAA
                   t      ACCA ccaaccttcc
                     G + T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C C C C C     A
      C A A        G      | | | | |     G
    G       G G C C       G G G G G     C
    G         | | |                 T T
    T       A C G G
      A G          A     CGGCCGCAAGGCCTT
                    C - G
                    C - G
                    C - G
                    G - C
                    G + T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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