The detailed information of tRNA gene sequence


Sequence ID>WENV170018737
Genome IDBBPD01000616
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2069
End posion on genome 2159
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttcgacagcc
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGAATGCGCCGGACTCGAAATCCGGTACACGGTTTCACCGT
GTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aaatcaacaa
Secondary structure (Cloverleaf model)
>WENV170018737	Ser	CGA
                   c      GCCA aaatcaacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TACACGGTTTCACCGTGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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