The detailed information of tRNA gene sequence


Sequence ID>WENV170018739
Genome IDBBPD01000629
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1207
End posion on genome 1132
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ctcccgcgag
tRNA gene sequence 
GGGGCCATAGCTCAGTTGGGAGAGCGCTTGAATGGCATTCAAGAGGTCGGCGGTTCGATT
CCGCCTGGCTCCACCA
Downstream region at tRNA end position 
gcgcggctct
Secondary structure (Cloverleaf model)
>WENV170018739	Ala	GGC
                   g      ACCA gcgcggctct
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          T T
                    T     C C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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