The detailed information of tRNA gene sequence


Sequence ID>ENV08001999
Genome IDABOK01268333
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 86
End posion on genome 1
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
agcattcgat
tRNA gene sequence 
GCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTG
AGGGTTCAAGTCCCTCTCTTCGCACCn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001999	Leu	CAG
                   t      ACCn nnnnnnnnnn
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    T       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGTTCTTACGGACGT
                    C - G
                    T - A
                    A - T
                    G + T
                    C - G
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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