The detailed information of tRNA gene sequence


Sequence ID>WENV170018790
Genome IDBBPD01000997
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2756
End posion on genome 2667
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acccccccgc
tRNA gene sequence 
GGACAGGTGGCGGAGTGGTCGATCGCGCCGGTCTCGAAAACCGGAATACCTGCAAGGGTA
TCGTGGGTTCGAATCCCACCCTGTCCGCCA
Downstream region at tRNA end position 
gtttggtgcc
Secondary structure (Cloverleaf model)
>WENV170018790	Ser	CGA
                   c      GCCA gtttggtgcc
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C G       G T G G G     C
    G       + | | |                 T T
    T       T C G C
      C G A        G     AATACCTGCAAGGGTATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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