The detailed information of tRNA gene sequence


Sequence ID>WENV170018800
Genome IDBBPD01001068
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2057
End posion on genome 1981
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cgcctcggtc
tRNA gene sequence 
CGGGGAATAGCTCAGCCTGGTAGAGCACTGTCTTCGGGAGGCAGGGGCCGGAGGTTCGAA
TCCTCTTTCCCCGACCA
Downstream region at tRNA end position 
ttttccatgt
Secondary structure (Cloverleaf model)
>WENV170018800	Pro	CGG
                   c      ACCA ttttccatgt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    G - C
                    T + G
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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