The detailed information of tRNA gene sequence


Sequence ID>WENV170018822
Genome IDBBPD01001249
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2779
End posion on genome 2855
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
tcgaccccgt
tRNA gene sequence
GGCTATGTAGCTCAGCCGGTTAGAGCGTGGCACTCATAATGCCGAGGTCGGTGGTTCGAG
TCCACCCATAGCCACCA
Downstream region at tRNA end position
caccnnnnnn
Secondary structure (Cloverleaf model)
>WENV170018822	Met	CAT
                   t      ACCA caccnnnnnn
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     T - A
                     G - C          T G
                    T     C C A C C     A
      C G A        A      | | | | |     G
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T + G
                    G - C
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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