The detailed information of tRNA gene sequence


Sequence ID>WENV170018839
Genome IDBBPD01001376
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 180
End posion on genome 269
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atggctaccc
tRNA gene sequence 
GGAGAGATGGATGAGCGGTTTAAGTCGCACGCCTGGAAAGCGTGTGTGGGCTAACCCCCA
CCGCGGGTTCGAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
aaaccagaaa
Secondary structure (Cloverleaf model)
>WENV170018839	Ser	GGA
                   c      GCCA aaaccagaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TGTGGGCTAACCCCCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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