The detailed information of tRNA gene sequence


Sequence ID>WENV170018847
Genome IDBBPD01001471
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 4162
End posion on genome 4251
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cagggttagg
tRNA gene sequence 
GGAAGCGTGGCAGAGTGGTCGATTGCACCGGTCTTGAAAACCGGCAACGGGTAACCCCGT
TCGTGAGTTCGAATCTCACCGCTTCCGCCA
Downstream region at tRNA end position 
gcaggcgcat
Secondary structure (Cloverleaf model)
>WENV170018847	Ser	TGA
                   g      GCCA gcaggcgcat
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G       + | | |                 T T
    T       T T G C
      C G A        A     CAACGGGTAACCCCGTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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