The detailed information of tRNA gene sequence


Sequence ID>WENV170018909
Genome IDBBPD01002029
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2587
End posion on genome 2663
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ctctgcgcaa
tRNA gene sequence 
GCGGGTGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
CCCCGTCACTCGCGCCA
Downstream region at tRNA end position 
ggcgcggcgg
Secondary structure (Cloverleaf model)
>WENV170018909	Asp	GTC
                   a      GCCA ggcgcggcgg
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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