The detailed information of tRNA gene sequence


Sequence ID>WENV170019034
Genome IDBBPD01003151
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2
End posion on genome 91
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GGACAGGTGGCGGAGTGGTCGATCGCGCCGGTCTCGAAAACCGGAATACCTGCAAGGGTA
TCGTGGGTTCGAATCCCACCCTGTCCGCCA
Downstream region at tRNA end position 
cttcggaaca
Secondary structure (Cloverleaf model)
>WENV170019034	Ser	CGA
                   c      GCCA cttcggaaca
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C G       G T G G G     C
    G       + | | |                 T T
    T       T C G C
      C G A        G     AATACCTGCAAGGGTATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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