The detailed information of tRNA gene sequence


Sequence ID>ENV08002002
Genome IDABOK01295578
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 25
End posion on genome 101
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gcagtgcagt
tRNA gene sequence 
GCGTCCGTAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGGTGGTTCGAG
TCCACTCGGACGCACCA
Downstream region at tRNA end position 
tannnnnnnn
Secondary structure (Cloverleaf model)
>ENV08002002	Val	GAC
                   t      ACCA tannnnnnnn
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C          T G
                    T     T C A C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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