The detailed information of tRNA gene sequence


Sequence ID>WENV170019133
Genome IDBBPD01004440
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2580
End posion on genome 2507
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cgcgccgcgg
tRNA gene sequence 
GGTCCGGTGGCCGAGTGGTCAGGCACGGGACTGCAAATCCCCCAACGGCGGTTCGATTCC
GCCCCGGACCTCCA
Downstream region at tRNA end position 
aggcgcgcgc
Secondary structure (Cloverleaf model)
>WENV170019133	Cys	GCA
                   g      TCCA aggcgcgcgc
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T T
                    T     C C G C C     A
        G A        G      | | | | |     G
      T     G C C G       G G C G G     C
      G       | | |                 T T
      G     A G G C
        T C        A     CAAC
                    C   C
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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