The detailed information of tRNA gene sequence


Sequence ID>WENV170019136
Genome IDBBPD01004515
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1580
End posion on genome 1672
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnnnnct
tRNA gene sequence 
GGAGTGATGACCGAGAGGCCGAAGGTGCTCCCCTGCTAAGGGAGTATGCGGTGTAGAGCC
GCATCGAGGGTTCGAATCCCTCTCACTCCGCCA
Downstream region at tRNA end position 
ccattttggc
Secondary structure (Cloverleaf model)
>WENV170019136	Ser	GCT
                   t      GCCA ccattttggc
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TATGCGGTGTAGAGCCGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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