The detailed information of tRNA gene sequence


Sequence ID>ENV08002003
Genome IDABOK01301372
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 74
End posion on genome 1
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gccaaattca
tRNA gene sequence 
GCCGGCTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATT
CCGGTAGCCGGCACnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08002003	Thr	TGT
                   a      ACnn nnnnnnnnnn
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A          T T
                    T     T G G C C     A
      T G A        A      | | |   |     G
    A       C T C G       A C C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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