The detailed information of tRNA gene sequence


Sequence ID>WENV170019187
Genome IDBBPD01005477
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1214
End posion on genome 1289
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position
ccttcaacgt
tRNA gene sequence
GGGGCTGTAGCTCAATCGGGAGAGCGTTTGACTGGCAGTCAAAAGGTCGGGGGTTCGAAT
CCCCCCAGCTCCACCA
Downstream region at tRNA end position
tttgtgaccc
Secondary structure (Cloverleaf model)
>WENV170019187	Ala	GGC
                   t      ACCA tttgtgaccc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     C C C C C     A
      T A A        A      | | | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    T - A
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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