The detailed information of tRNA gene sequence


Sequence ID>WENV170019209
Genome IDBBPD01006072
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1354
End posion on genome 1264
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position
ggagtcttga
tRNA gene sequence
GGAGGGGTGGCCGAGTGGTTTAAGGCGGCGGTCTTGAAAACCGCTGGGTGGCCTAGCTAT
CCCGTGGGTTCGAATCCCACCTCCTCCGCCG
Downstream region at tRNA end position
gtgcgatgaa
Secondary structure (Cloverleaf model)
>WENV170019209	Ser	TGA
                   a      GCCG gtgcgatgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGGGTGGCCTAGCTATCCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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