The detailed information of tRNA gene sequence


Sequence ID>WENV170019219
Genome IDBBPD01006194
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1543
End posion on genome 1457
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tacagatttt
tRNA gene sequence 
GGAGAGGTGCTGGAGTGGCCGATCAGGCGCGCCTGGAGAGCGCGTGTCGGATTTTCCGAC
CGTGGGTTCGAATCCCACCCTCTCCGCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170019219	Ser	GGA
                   t      GCnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G T C       G T G G G     C
    G       + | | |                 T T
    C       T C A G
      C G A        G     TGTCGGATTTTCCGACC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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