The detailed information of tRNA gene sequence


Sequence ID>WENV170019233
Genome IDBBPD01006375
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 9619
End posion on genome 9695
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
agataaatct
tRNA gene sequence 
GGGCCCTTAGCTCAGCTGGTTAGAGCGCATCCCTGATAAGGATGAGGTCTCTGGTTCGAG
TCCAGAAGGGCCCACCA
Downstream region at tRNA end position 
ttttttgtgg
Secondary structure (Cloverleaf model)
>WENV170019233	Ile	GAT
                   t      ACCA ttttttgtgg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     A G A C C     A
      C G A        A      | | | | |     G
    T       C T C G       T C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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