The detailed information of tRNA gene sequence


Sequence ID>WENV170019247
Genome IDBBPD01006682
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1590
End posion on genome 1679
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cctgctcggc
tRNA gene sequence 
GGATGGGTGGCCGAGTGGCTGAAGGCGCCCGCTTGGAAAGCGGGTTGCCCCTTAGGGGGC
ACGCGAGTTCGAATCTCGCCCCATCCGCCG
Downstream region at tRNA end position 
agcaggggga
Secondary structure (Cloverleaf model)
>WENV170019247	Ser	GGA
                   c      GCCG agcaggggga
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     C G C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G A G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TTGCCCCTTAGGGGGCAC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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