The detailed information of tRNA gene sequence


Sequence ID>WENV170019279
Genome IDBBPD01007533
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 455
End posion on genome 530
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gtaagaatat
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATC
CCGCTTGGCTCCACCA
Downstream region at tRNA end position 
tatacagcct
Secondary structure (Cloverleaf model)
>WENV170019279	Ala	TGC
                   t      ACCA tatacagcct
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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