The detailed information of tRNA gene sequence


Sequence ID>WENV170019280
Genome IDBBPD01007638
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 889
End posion on genome 797
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tatttatcct
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGTTGATGGCACTCGCCTGGAAAGCGTGTAAGGGGATAACCTCT
CCTTCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ggtatatcct
Secondary structure (Cloverleaf model)
>WENV170019280	Ser	GGA
                   t      GCCA ggtatatcct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G       + + | |                 T T
    T       T G G C
      T G A        A     TAAGGGGATAACCTCTCCTTC
                    C - G
                    T   T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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