The detailed information of tRNA gene sequence


Sequence ID>WENV170019315
Genome IDBBPD01008395
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 181
End posion on genome 87
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cctataatat
tRNA gene sequence 
GGAGAAGTACCCAAGTTTGGTCGAAGGGGCGCCCCTGCTAAGGGCGTAGGTCGGCAAACA
CCGGCGCGAGGGTTCGAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
tagaaatatg
Secondary structure (Cloverleaf model)
>WENV170019315	Ser	GCT
                   t      GCCA tagaaatatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
    T T G A        A      | | | | |     G
  T         A C C C       G A G G G     C
  G           | | |                 T T
  G         A G G G
    T C G A        G     TAGGTCGGCAAACACCGGCGC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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