The detailed information of tRNA gene sequence


Sequence ID>WENV170019366
Genome IDBBPD01009241
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1635
End posion on genome 1560
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
caccacctat
tRNA gene sequence 
GGAGTCGTGGTGTAGCGGTAAACATGCCGGCCTGTCACGCCGGAGATCGCGGGTTCGATT
CCCGTCGACTCCGCCA
Downstream region at tRNA end position 
tttagcaaga
Secondary structure (Cloverleaf model)
>WENV170019366	Asp	GTC
                   t      GCCA tttagcaaga
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     C - G
                     G - C          T T
                    T     T G C C C     A
      C G A        G      + | | | |     G
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    T       A C A T
      A A          G     AGATC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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