The detailed information of tRNA gene sequence


Sequence ID>ENV08002005
Genome IDABOK01308326
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 84
End posion on genome 7
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
actcttcttt
tRNA gene sequence 
AGGACCGTAGCTCAGCTGGTTAGACGCGCTGCCTTGACATGGCAGAGGTCGCTGGTTCGA
TTCCAGTCGGTCCTACCA
Downstream region at tRNA end position 
acattcnnnn
Secondary structure (Cloverleaf model)
>ENV08002005	Val	GAC
                   t      ACCA acattcnnnn
                     A - T
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          T T
                    T     T G A C C     A
    T C G A        A      + | | | |     G
  G         C T C G       G C T G G     C
  G             | |                 T T
  T         A C G C
    T A G          G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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