The detailed information of tRNA gene sequence


Sequence ID>WENV170019392
Genome IDBBPD01010188
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2806
End posion on genome 2902
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position
gactgacagc
tRNA gene sequence
GGGAGTAGATAGGTTCTGGTGTGCCTTCCGGACTTCAAATCCGTCAGCGGTCTCTAGAAC
AGGCCGCGGTGGGTTCGATTCCCACATGCTCCCGCCA
Downstream region at tRNA end position
actaagcatc
Secondary structure (Cloverleaf model)
>WENV170019392	SeC(p)	TCA
                   c      GCCA actaagcatc
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     A - T
                     G   A          T T
                    A     C A C C C     A
      T C T        T      | | | | |     G
    G       T G G A       G T G G G     C
    G       + | | |                 T T
    T       G C C T
      G T          T     CAGCGGTCTCTAGAACAGGCCGCG
                    C   T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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