The detailed information of tRNA gene sequence


Sequence ID>WENV170019412
Genome IDBBPD01011375
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 473
End posion on genome 396
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttagagattT
tRNA gene sequence 
GGGCCCATGGCTCAGTTGGTTAGAGCAGCGGACTCATAATCCGTCGGTCGTAGGTTCGAG
TCCTACTGGGCCCATCA
Downstream region at tRNA end position 
aataagtttg
Secondary structure (Cloverleaf model)
>WENV170019412	Met	CAT
                   T      ATCA aataagtttg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     C A T C C     A
      T G A        G      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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